STAT6 regulates gene expression of TAMs in the TME of advanced stage MF. (A) Transcriptomes of macrophages by scRNAseq from individual MF skin tumors (n = 3, 2312 cells) and NS samples (n = 4, 322 cells), color-coded by subject, (B) revealing 9 discrete Louvain clusters. (C) Gene expression from the 9 discrete Louvain clusters in panel B, showing examples of highly significant DEGs in each of the clusters. Cluster numbers are indicated at the top. Each column represents a cell. (D) Dot-plot showing the proportion of cells and the scaled average gene differential expression of the macrophage tumor-associated genes selected in panel C. (E) Bar plot showing the differential expression of the genes selected in panel C after STAT6 inhibition for 48 hours of MF skin tumors (Log2FC > ± 0.58 and P < .05). (F) Three-color immunofluorescence microscopy showing coexpression of CD163, MRC1, and CCL17 or CTSC, in advanced-stage MF skin explants (n = 5) cultured for 5 days with/without AS1517499. Representative examples are shown at ×600, inset double the scale.
Figure 5.

STAT6 regulates gene expression of TAMs in the TME of advanced stage MF. (A) Transcriptomes of macrophages by scRNAseq from individual MF skin tumors (n = 3, 2312 cells) and NS samples (n = 4, 322 cells), color-coded by subject, (B) revealing 9 discrete Louvain clusters. (C) Gene expression from the 9 discrete Louvain clusters in panel B, showing examples of highly significant DEGs in each of the clusters. Cluster numbers are indicated at the top. Each column represents a cell. (D) Dot-plot showing the proportion of cells and the scaled average gene differential expression of the macrophage tumor-associated genes selected in panel C. (E) Bar plot showing the differential expression of the genes selected in panel C after STAT6 inhibition for 48 hours of MF skin tumors (Log2FC > ± 0.58 and P < .05). (F) Three-color immunofluorescence microscopy showing coexpression of CD163, MRC1, and CCL17 or CTSC, in advanced-stage MF skin explants (n = 5) cultured for 5 days with/without AS1517499. Representative examples are shown at ×600, inset double the scale.

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